Fig. 5

Gene summary page for MLH1 as a candidate gene associated with MSI. This is reached by selecting a gene, miR, or protein listed in the outcome summary page (Fig. 4). Genomic profile tabs include a the status of copy number variation, b mutation frequency, and c mean expression levels based on RNA-Seq. Genomic profile tabs vary depending on category (gene, miR, or protein), clinical parameter, and cancer type being scrutinized. Tables to the right of the genomic profile graphs display percentiles or quartiles of genomic values for each category in a clinical parameter